Nuclear factor NF-kappa-B p50 subunit

Protein Family Details

  Property   Value
 Name Nuclear factor NF-kappa-B p50 subunit
Family ID 3320_l
First Chain 2i9t (B)
  No of Chains 12
  No of Clusters 8
  No of Rep. Chains 12
  No of Dimensions 6
No of Domain Movements 4

Clusters

Cluster ID Diameter (A) No of Chains Representative Members
1 0.0 1 1ooa(A) 1ooa(A) 
2 0.0 1 1ooa(B) 1ooa(B) 
3 0.0 1 1nfk(A) 1nfk(A) 
4 0.0 1 1vkx(B) 1vkx(B) 
5 0.0 1 1nfk(B) 1nfk(B) 
6 0.0 1 2i9t(B) 2i9t(B) 
7 0.0 1 1svc(P) 1svc(P) 
8 0.65 5 Extended 1le5(B)  1le5(F)  1le9(B)  1le9(F)  1lei(B) 

Dimensions

Dimension ID Chain 1 Chain 2 Dyndom Run
1 (Vector: v1) 1ooa (A) 2i9t (B) true
2 (Vector: v2) 1ooa (A) 1ooa (B) true
3 (Vector: v3) 2i9t (B) 1svc (P) true
4 (Vector: v4) 2i9t (B) 1nfk (B) true
5 (Vector: v5) 1svc (P) 1le9 (F) false
6 (Vector: v6) 2i9t (B) 1vkx (B) false

Associated Chains for 1-dimension

Chain ID Protein Name Sequence Length Resolution Cluster ID Projection
2i9t (B) Nuclear factor NF-kappa-B p105 subunit 312 2.8 6 1.0v1
1ooa (A) Nuclear factor NF-kappa-B p105 subunit 313 2.45 1 0

Associated Chains for 2-dimensions

Chain ID Protein Name Sequence Length Resolution Cluster ID Projection
1ooa (B) Nuclear factor NF-kappa-B p105 subunit 313 2.45 2 1.0v2
1ooa (A) Nuclear factor NF-kappa-B p105 subunit 313 2.45 1 0

Associated Chains for 3-dimensions

Chain ID Protein Name Sequence Length Resolution Cluster ID Projection
1lei (B) NUCLEAR FACTOR NF-KAPPA-B P50 SUBUNIT 312 2.7 8 0.97v1 + (-0.05)v2 + 0.53v3
1svc (P) PROTEIN (NUCLEAR FACTOR KAPPA-B (NF-KB)) 311 2.6 7 1.0v1 + 1.0v3
2i9t (B) Nuclear factor NF-kappa-B p105 subunit 312 2.8 6 1.0v1

Associated Chains for 4-dimensions

Chain ID Protein Name Sequence Length Resolution Cluster ID Projection
1le5 (F) Nuclear factor NF-kappa-B p50 subunit 313 2.75 8 1.01v1 + (-0.02)v2 + 0.69v3 + 0.28v4
1le5 (B) Nuclear factor NF-kappa-B p50 subunit 313 2.75 8 1.04v1 + 0.56v3 + 0.28v4
1nfk (A) PROTEIN (NUCLEAR FACTOR KAPPA-B (NF-KB)) 312 2.3 3 0.95v1 + (-0.02)v2 + 0.32v3 + 0.46v4
1nfk (B) PROTEIN (NUCLEAR FACTOR KAPPA-B (NF-KB)) 312 2.3 5 1.0v1 + 1.0v4
2i9t (B) Nuclear factor NF-kappa-B p105 subunit 312 2.8 6 1.0v1

Associated Chains for 5-dimensions

Chain ID Protein Name Sequence Length Resolution Cluster ID Projection
1le9 (B) NUCLEAR FACTOR NF-KAPPA-B P50 SUBUNIT 312 3 8 0.99v1 + (-0.04)v2 + 1.12v3 + 0.15v4 + 0.86v5
1le9 (F) NUCLEAR FACTOR NF-KAPPA-B P50 SUBUNIT 312 3 8 1.0v1 + 1.0v3 + 1.0v5
1svc (P) PROTEIN (NUCLEAR FACTOR KAPPA-B (NF-KB)) 311 2.6 7 1.0v1 + 1.0v3

Associated Chains for 6-dimensions

Chain ID Protein Name Sequence Length Resolution Cluster ID Projection
1vkx (B) PROTEIN (NF-KAPPA B P50 SUBUNIT) 312 2.9 4 1.0v1 + 1.0v6
2i9t (B) Nuclear factor NF-kappa-B p105 subunit 312 2.8 6 1.0v1