Transesterase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-110   MET-111  4.0 4.0 -2.8 2.0 51.1 53.5 -11.8
 MET-111   PRO-112  3.6 3.4 2.3 -2.0 91.1 88.6 0.3
 PRO-112   VAL-113  3.5 3.4 2.8 -11.4 156.0 154.5 150.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-125   ARG-126  9.3 9.3 -4.3 -1.1 45.3 41.7 40.5
 ARG-126   GLU-127  7.6 7.6 -0.9 0.8 84.4 87.2 7.5
 GLU-127   ARG-128  4.8 4.7 4.7 -2.5 51.0 51.7 34.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-143   LEU-144  3.9 4.0 -2.1 2.4 69.4 70.5 3.1
 LEU-144   SER-145  1.2 1.2 -1.6 -9.4 15.9 15.8 104.9
 SER-145   TYR-146  0.8 0.8 -42.0 48.0 70.8 74.6 18.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-147   PHE-148  7.2 6.7 -5.1 2.7 152.0 143.6 42.9
 PHE-148   LEU-149  7.6 7.3 -19.7 24.1 111.4 108.4 23.6
 LEU-149   HIS-150  5.0 4.7 34.9 -28.8 118.7 127.4 65.5
 HIS-150   PRO-151  6.5 6.7 -8.0 3.3 80.3 80.5 -21.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-158   GLN-159  17.0 16.8 3.0 -16.3 143.8 139.4 176.8
 GLN-159   GLY-160  18.1 18.1 22.4 -16.2 113.7 122.6 -119.0
 GLY-160   TYR-161  18.3 18.1 -2.5 4.6 46.6 41.0 -30.2
 TYR-161   LEU-162  15.4 15.2 -4.8 7.7 103.3 99.2 54.5
 LEU-162   GLN-163  14.9 14.4 50.5 -81.7 68.2 73.7 -96.5
 ARG-173   LEU-174  10.1 10.9 -29.4 5.2 27.5 45.0 198.8
 LEU-174   ALA-175  9.7 9.4 16.5 1.0 120.6 125.7 -135.0
 ALA-175   PRO-176  10.0 9.7 -1.3 2.0 92.7 92.8 40.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-178   VAL-179  2.1 2.1 -0.5 2.0 99.9 100.6 25.4
 VAL-179   ASN-180  4.9 5.1 1.0 -4.2 101.3 101.0 -22.3
 ASN-180   ASP-181  6.0 6.3 -1.3 2.3 47.8 50.0 -11.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees