Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-107
LEU-108
7.9
7.3
11.1
-4.1
110.3
115.1
-10.9
LEU-108
GLY-109
4.5
3.7
-4.5
20.2
138.2
134.8
30.3
GLY-109
ILE-110
2.2
1.6
-51.3
32.4
62.6
69.0
22.5
ILE-110
SER-111
3.9
3.5
-4.5
-8.7
59.7
66.5
28.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-208
GLY-209
12.1
12.2
26.8
-27.8
98.7
92.3
-29.2
GLY-209
LEU-210
10.8
9.8
2.5
19.6
104.5
111.5
-27.8
LEU-210
ILE-211
7.4
6.5
-1.6
17.4
22.5
25.4
-41.1
ILE-211
ASP-212
6.5
6.6
179.8
151.7
110.0
135.9
8.6
ASP-212
SER-213
3.6
3.7
138.5
-94.9
71.0
61.8
79.6
SER-213
LYS-214
4.6
3.4
-1.0
7.3
78.5
75.3
8.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees