Protein (Arrestin)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-185   PRO-186  3.9 4.8 -9.6 -1.5 79.2 40.2 31.0
 PRO-186   GLN-187  1.2 6.8 14.1 37.6 57.5 76.9 129.8
 GLN-187   PRO-188  3.6 8.5 -1.9 -0.2 59.6 111.1 65.9
 PRO-188   ARG-189  7.1 11.5 -41.6 -51.0 119.5 63.0 92.5
 ARG-189   ALA-190  9.9 14.8 -9.0 -54.3 123.7 112.3 -148.7
 ALA-190   GLU-191  12.2 18.3 39.5 -14.8 110.9 122.0 -21.9
 GLU-191   ALA-192  15.4 21.6 -25.8 31.2 110.0 116.7 -0.7
 ALA-192   SER-193  19.0 25.2 -5.3 25.0 71.8 62.2 -10.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-293   ALA-294  14.1 14.7 -29.5 6.0 79.6 82.7 29.3
 ALA-294   LEU-295  10.4 11.0 8.3 -13.8 77.6 74.5 -0.2
 LEU-295   ASP-296  8.6 9.2 -19.6 37.9 86.3 87.0 -36.9
 ASP-296   GLY-297  5.5 6.2 123.9 101.6 142.1 153.9 605.4
 GLY-297   LYS-298  7.0 5.0 -35.6 -24.9 48.5 81.5 68.9
 LYS-298   ILE-299  8.9 7.6 9.2 -21.7 72.1 118.1 -55.3
 ILE-299   LYS-300  12.4 8.7 -24.6 -78.4 77.7 23.1 -980.9
 LYS-300   HIS-301  14.1 10.6 80.3 174.4 65.1 80.0 -164.7
 HIS-301   GLU-302  13.4 12.5 -140.7 -12.8 153.6 141.5 850.8
 GLU-302   ASP-303  15.7 14.0 -130.5 -12.4 142.4 127.0 -657.3
 ASP-303   THR-304  13.2 14.9 137.6 -50.5 78.7 47.4 151.6
 THR-304   ASN-305  10.8 12.1 50.0 6.1 35.6 39.4 202.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-310   ILE-311  6.6 5.3 -7.1 3.1 140.7 139.7 -28.4
 ILE-311   ILE-312  6.8 6.0 4.8 -3.1 116.7 119.2 26.8
 ILE-312   LYS-313  10.3 9.4 34.0 -11.1 57.1 45.7 60.2
 LYS-313   GLU-314  11.6 11.7 -4.0 -12.3 97.0 105.3 -23.6
 GLU-314   GLY-315  14.9 14.3 -0.3 -37.2 53.1 77.5 98.3
 GLY-315   ILE-316  17.8 18.0 63.1 2.2 163.5 146.7 -306.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-322   ILE-323  9.9 9.5 -91.8 33.5 103.5 121.0 -133.1
 ILE-323   LEU-324  9.8 9.0 -10.9 -13.5 175.1 160.8 -111.4
 LEU-324   VAL-325  10.8 9.3 2.6 3.1 72.5 61.0 31.7
 VAL-325   SER-326  9.9 9.2 -6.3 14.7 176.0 173.6 29.1
 SER-326   TYR-327  11.2 10.5 -3.4 3.8 104.9 105.4 5.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees