Glutamate Receptor Ionotropic, Nmda 2A
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-134
GLY-135
2.9
3.3
-6.0
14.1
150.1
149.5
46.6
GLY-135
ILE-136
1.1
1.4
14.9
-14.5
108.2
110.2
12.6
ILE-136
SER-137
3.9
3.7
6.2
-2.3
108.1
108.6
48.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-232
THR-233
11.2
10.6
14.5
7.8
146.6
154.5
-175.7
THR-233
ILE-234
8.9
8.9
-17.4
5.0
46.2
49.3
-18.5
ILE-234
GLY-235
10.1
10.9
-22.4
127.4
89.0
68.2
-224.7
TYR-238
ILE-239
8.6
7.7
152.9
-77.9
81.5
98.0
1.4
ILE-239
PHE-240
4.9
4.3
-8.0
-2.2
24.3
12.9
85.0
PHE-240
ALA-241
3.7
3.5
3.1
1.5
90.3
96.7
-6.6
ALA-241
THR-242
0.8
0.7
4.6
-7.9
47.5
49.6
-12.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees