Actin, Cytoplasmic 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-185   THR-186  4.1 3.8 -8.5 2.9 156.9 152.1 72.7
 THR-186   ASP-187  3.8 3.4 4.1 -19.0 80.3 78.1 -74.0
 ASP-187   TYR-188  7.0 6.5 11.4 -4.6 114.7 118.2 2.0
 TYR-188   LEU-189  6.5 6.3 -2.0 10.4 115.6 111.5 35.7
 LEU-189   MET-190  4.7 4.4 -2.5 14.3 142.2 142.7 141.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-205   ARG-206  3.6 4.2 -112.8 114.6 167.6 149.3 -96.9
 ARG-206   GLU-207  3.5 4.4 -1.2 -36.1 103.3 86.1 -227.0
 GLU-207   ILE-208  3.6 3.0 15.1 -21.7 72.6 83.4 -103.2
 ILE-208   VAL-209  1.0 0.9 23.2 -0.8 12.5 15.0 230.2
 VAL-209   ARG-210  1.1 1.3 3.0 -12.1 51.3 56.0 -77.7
 ARG-210   ASP-211  2.5 2.2 24.0 -11.8 90.6 92.0 80.6
 ASP-211   ILE-212  4.7 4.5 -2.7 -2.4 118.9 120.5 -18.1
 ILE-212   LYS-213  4.7 4.7 17.6 -21.8 16.1 17.6 -11.4
 LYS-213   GLU-214  3.2 3.4 -5.4 9.0 102.1 101.1 27.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 CYS-217   TYR-218  6.4 6.5 10.4 -11.4 138.5 137.9 6.0
 TYR-218   VAL-219  7.7 7.6 -15.5 22.7 33.2 34.4 17.1
 VAL-219   ALA-220  6.7 6.5 6.6 -17.1 133.1 125.1 115.2
 ALA-220   LEU-221  8.2 8.3 12.9 -7.1 153.6 158.5 -110.2
 LEU-221   ASP-222  9.2 9.1 -2.5 0.2 51.8 51.8 26.3
 ASP-222   PHE-223  9.1 9.2 4.0 -7.5 47.2 46.2 -47.3
 PHE-223   GLU-224  8.2 8.5 4.2 0.1 95.3 90.4 8.5
 GLU-224   GLN-225  11.0 11.4 28.3 -21.9 82.5 82.1 12.4
 GLN-225   GLU-226  13.4 13.7 0.2 -6.7 18.6 13.4 -42.1
 GLU-226   MET-227  12.6 12.9 1.1 15.3 58.3 60.3 94.9
 MET-227   ALA-228  13.3 13.4 -7.5 8.4 78.0 85.5 43.5
 ALA-228   THR-229  16.5 16.9 -19.8 52.6 107.8 124.4 154.5
 THR-229   ALA-230  17.9 17.6 -39.7 -30.3 169.7 165.0 -678.3
 ALA-230   ALA-231  16.6 16.5 28.9 -38.2 58.4 75.2 49.9
 ALA-231   SER-232  19.9 19.0 9.4 4.7 83.0 97.1 -17.8
 SER-232   SER-233  21.8 21.7 -115.2 -63.7 118.6 141.2 1533.0
 SER-233   SER-234  19.8 21.8 -132.2 -145.9 100.8 134.5 -1916.6
 SER-234   SER-235  21.5 20.1 113.8 26.5 57.2 87.1 306.8
 SER-235   LEU-236  18.6 19.8 -12.9 -51.3 97.3 97.4 -50.3
 LEU-236   GLU-237  15.4 16.0 68.5 -19.5 18.3 32.6 347.3
 GLU-237   LYS-238  15.7 15.7 -8.4 19.0 134.5 131.7 177.1
 LYS-238   SER-239  14.0 14.1 -14.8 25.2 144.7 150.3 17.6
 SER-239   TYR-240  13.3 13.8 16.7 -5.0 58.9 66.4 43.6
 TYR-240   GLU-241  10.3 10.8 15.2 -15.9 27.9 17.4 -7.9
 GLU-241   LEU-242  10.1 10.6 15.6 -11.8 77.9 74.4 42.6
 LEU-242   PRO-243  6.8 7.4 8.9 -27.1 18.4 31.2 -148.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-249   ILE-250  13.8 13.6 4.6 -4.9 40.4 42.6 -8.6
 ILE-250   GLY-251  11.5 11.5 5.3 8.7 31.4 29.4 165.1
 GLY-251   ASN-252  12.8 12.9 17.4 -11.1 41.6 37.5 -12.7
 ASN-252   GLU-253  11.2 11.3 -5.7 -1.8 81.9 81.1 -6.5
 GLU-253   ARG-254  8.0 8.3 4.1 -0.3 83.8 83.6 47.7
 ARG-254   PHE-255  7.5 7.6 -2.2 -2.1 149.3 148.8 -19.7
 PHE-255   ARG-256  6.6 6.7 4.7 4.6 70.8 70.0 90.8
 ARG-256   CYS-257  6.1 6.1 -8.4 22.5 73.1 73.5 28.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees