Tryptophan Synthase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-103   SER-104  7.9 8.1 -15.1 16.8 25.7 20.6 -6.5
 SER-104   GLU-105  8.9 9.3 6.6 -1.9 131.6 128.8 31.0
 GLU-105   ILE-106  6.0 6.2 -0.5 1.4 93.8 90.8 -9.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-115   GLY-116  7.7 7.7 2.7 2.9 89.2 86.6 -33.5
 GLY-116   VAL-117  4.3 4.2 3.8 -1.1 64.0 63.2 36.1
 VAL-117   ALA-118  4.5 4.3 -1.7 9.1 56.3 54.7 -5.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-128   LYS-129  8.6 8.7 -11.5 -3.5 57.0 56.8 76.1
 LYS-129   CYS-130  7.6 7.7 -19.4 22.9 89.7 94.1 -0.1
 CYS-130   ARG-131  4.1 4.2 4.1 -1.0 112.1 110.7 17.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-143   PRO-144  7.3 7.1 2.0 -1.0 87.5 87.2 69.7
 PRO-144   ASN-145  4.7 4.6 -10.5 5.7 30.1 26.9 70.1
 ASN-145   VAL-146  4.6 4.5 -7.1 10.8 64.4 65.4 -89.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-154   GLU-155  4.4 4.6 9.2 0.8 100.9 101.1 -86.5
 GLU-155   VAL-156  6.5 6.7 -8.2 6.4 93.5 88.8 6.1
 VAL-156   ILE-157  6.5 6.4 2.0 0.1 79.1 79.1 100.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-182   THR-183  5.8 5.7 9.3 -8.5 47.7 39.2 56.7
 THR-183   ALA-184  7.1 7.1 23.2 -27.6 44.0 37.8 -25.7
 ALA-184   HIS-185  4.1 4.1 -11.8 12.1 70.4 75.3 9.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees