Methionyl-Trna Synthetase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-118   TYR-119  8.7 8.3 -8.3 9.4 65.2 61.4 6.2
 TYR-119   GLY-120  5.4 5.3 19.3 -29.6 136.1 137.9 27.3
 GLY-120   GLU-121  4.1 3.7 34.1 -2.3 117.5 126.3 -55.2
 GLU-121   TYR-122  1.5 2.8 23.3 12.0 168.1 147.4 -106.9
 TYR-122   GLU-123  2.5 5.1 35.4 -94.1 119.4 134.3 139.0
 GLU-123   GLY-124  2.8 4.1 8.3 -60.1 123.1 144.5 120.4
 GLY-124   LEU-125  6.0 6.0 7.6 23.7 115.3 110.2 -24.9
 LEU-125   TYR-126  8.7 8.7 -1.2 -2.9 127.4 130.7 -7.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-153   ARG-154  7.7 7.0 21.3 -28.0 164.5 156.6 22.0
 ARG-154   LYS-155  7.6 7.4 5.0 -26.9 112.6 131.7 32.6
 LYS-155   GLU-156  4.6 5.6 14.1 -28.8 132.8 140.1 42.3
 GLU-156   GLY-157  5.8 7.1 -4.3 29.7 62.4 46.1 -45.4
 GLY-157   ASN-158  4.7 6.0 -24.5 12.5 84.4 84.2 9.1
 ASN-158   TYR-159  7.4 7.8 -8.8 -4.5 65.2 57.1 30.3
 TYR-159   PHE-160  8.9 8.9 -1.4 6.2 135.6 129.7 17.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees