DNA Ligase, Nad-Dependent
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-66
GLN-67
20.3
20.3
-8.8
-18.8
128.2
129.4
189.1
GLN-67
ARG-68
18.2
18.2
20.2
-67.3
105.8
95.2
-4.5
ARG-68
VAL-69
15.0
15.0
-179.3
-51.0
74.7
30.5
-47.7
VAL-69
GLY-70
16.0
12.2
143.2
-20.4
41.1
100.9
1.5
GLY-70
GLY-71
15.8
10.5
33.8
42.7
78.4
58.6
-75.1
GLY-71
LYS-72
18.4
10.7
-144.5
-0.7
150.2
124.9
107.0
LYS-72
VAL-73
17.5
10.0
-2.7
69.0
84.0
60.0
-17.8
VAL-73
LEU-74
17.3
8.1
27.2
1.7
19.4
101.9
6.2
LEU-74
SER-75
15.5
10.5
-75.7
79.5
103.2
114.1
10.7
SER-75
GLY-76
16.7
11.7
-33.9
156.0
93.1
63.2
-85.6
GLY-76
PHE-77
13.3
12.9
144.0
3.4
80.9
86.9
2.2
PHE-77
GLU-78
9.6
9.8
18.1
9.5
18.8
21.0
14.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees