Dihydrodipicolinate Synthase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-14   THR-15  9.1 9.1 0.0 -1.9 124.2 124.4 69.9
 THR-15   PRO-16  10.4 10.4 -4.0 3.3 131.5 130.9 -89.9
 PRO-16   PHE-17  10.2 10.1 1.2 0.1 103.5 102.7 -55.9
 PHE-17   LYS-18  13.7 13.7 -0.9 -0.8 117.9 116.8 35.8
 LYS-18   ASN-19  15.4 15.4 -1.9 2.3 81.2 80.4 46.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-23   GLU-24  12.3 12.2 -2.6 5.0 47.2 45.1 152.9
 GLU-24   GLN-25  10.7 10.7 -0.9 6.3 96.2 96.2 53.6
 GLN-25   SER-26  9.8 9.8 -11.9 8.2 129.1 124.9 -235.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-29   LEU-30  4.5 4.5 -4.2 2.9 64.8 65.1 142.0
 LEU-30   ILE-31  1.7 1.6 3.2 -3.4 49.9 48.4 124.8
 ILE-31   LYS-32  0.9 0.9 1.0 4.4 79.4 78.6 -152.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-39   ASP-40  9.9 9.9 -3.3 2.6 9.3 9.2 34.3
 ASP-40   ALA-41  11.3 11.4 -0.1 -0.7 60.8 60.8 81.2
 ALA-41   VAL-42  9.8 9.7 0.5 3.5 45.0 46.2 73.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-47   THR-48  17.0 17.1 -2.3 5.5 51.7 52.1 10.5
 THR-48   GLY-49  13.7 13.8 -0.4 3.3 105.5 106.8 59.6
 GLY-49   GLU-50  12.8 12.9 -1.5 -2.5 86.9 85.9 -22.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-53   LEU-54  20.9 20.9 2.2 -5.2 129.5 128.1 62.8
 LEU-54   THR-55  18.9 18.9 -1.3 0.3 40.9 40.1 -17.7
 THR-55   HIS-56  20.8 20.8 -7.4 9.5 37.1 38.5 242.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-76   VAL-77  8.6 8.5 3.4 -2.0 121.7 121.5 -9.8
 VAL-77   LEU-78  8.4 8.5 0.1 0.3 81.1 80.3 180.4
 LEU-78   ALA-79  12.1 12.1 -1.8 2.6 67.4 66.6 -124.7
 ALA-79   GLY-80  12.8 12.7 -4.1 -0.3 67.6 67.4 237.7
 GLY-80   ALA-81  15.7 15.6 -5.4 -8.2 132.8 130.4 -928.1
 ALA-81   GLY-82  18.6 18.3 63.0 -66.1 96.9 92.9 204.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees