Myosin II Heavy Chain

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-26   LYS-27  26.8 25.9 -8.9 -3.6 129.5 129.9 -25.6
 LYS-27   VAL-28  27.4 26.2 14.6 -7.8 18.5 17.2 -27.2
 VAL-28   LYS-29  27.0 26.2 -17.2 0.1 111.4 93.3 -65.6
 LYS-29   GLN-30  30.2 30.0 8.5 -161.0 67.0 63.1 658.9
 PHE-36   LYS-37  31.3 28.7 -27.5 17.9 141.4 153.4 -130.4
 LYS-37   LEU-38  29.4 30.1 17.2 31.2 72.9 76.8 61.2
 LEU-38   THR-39  25.9 29.9 -43.9 -7.3 90.1 111.0 -13.7
 THR-39   VAL-40  27.8 26.1 55.6 13.5 26.2 36.5 411.0
 VAL-40   SER-41  28.5 25.9 159.9 -95.0 56.9 42.5 450.4
 SER-41   ASP-42  25.3 23.7 2.2 32.2 99.2 63.6 108.9
 ASP-42   LYS-43  22.3 21.6 -44.0 13.5 94.0 88.2 8.1
 LYS-43   ARG-44  20.0 18.8 3.8 1.6 143.4 135.8 -38.1
 ARG-44   TYR-45  16.7 15.4 -16.4 11.4 102.4 91.0 -36.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-48   ASN-49  10.3 9.8 0.3 18.7 90.6 80.0 2.9
 ASN-49   PRO-50  12.0 11.8 5.5 -12.7 161.5 151.5 50.9
 PRO-50   ASP-51  13.7 14.5 34.6 -86.1 99.9 107.6 -43.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-59   CYS-60  15.6 14.9 3.0 -2.2 87.2 81.2 54.7
 CYS-60   GLY-61  15.7 14.6 -3.7 2.5 161.8 171.0 -9.2
 GLY-61   GLU-62  14.3 13.2 -14.0 9.1 92.1 98.2 -29.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-88   ASN-89  4.7 3.7 2.8 9.0 29.9 24.7 68.6
 ASN-89   GLN-90  7.0 6.0 11.2 -9.5 98.1 101.8 21.1
 GLN-90   ARG-91  10.1 8.9 -5.6 13.0 127.9 128.7 16.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-100   ASP-101  19.3 18.1 35.0 -18.7 97.5 105.8 -67.9
 ASP-101   MET-102  15.9 14.6 -4.3 17.3 154.2 147.5 132.4
 MET-102   SER-103  13.6 12.0 -5.4 7.0 94.3 97.3 -5.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-108   ASN-109  8.3 7.2 19.1 -30.0 109.1 102.1 50.8
 ASN-109   GLU-110  6.6 5.5 0.9 -2.6 72.8 69.6 -29.7
 GLU-110   PRO-111  8.2 7.2 -4.7 1.8 73.1 73.3 3.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-493   ASN-494  2.3 1.9 -3.8 3.8 124.9 122.4 -4.0
 ASN-494   HIS-495  3.4 3.3 -1.0 3.1 59.3 58.5 11.8
 HIS-495   HIS-496  5.2 5.2 -8.0 0.7 71.4 75.9 20.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-519   ASP-520  12.1 11.5 -99.5 -175.2 48.1 59.8 -495.7
 ASP-520   SER-521  12.0 13.2 0.1 36.4 71.2 47.2 143.5
 SER-521   GLN-522  12.4 12.1 -36.2 7.9 137.1 129.6 -157.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-690   GLY-691  9.7 9.4 28.5 -18.4 108.3 97.4 -88.1
 GLY-691   VAL-692  5.9 5.7 7.7 -4.2 73.3 68.1 -18.9
 VAL-692   LEU-693  6.5 6.1 -2.4 8.7 143.2 147.5 74.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-763   ARG-764  14.6 16.4 4.1 -0.5 149.0 146.3 -38.4
 ARG-764   ILE-765  16.0 17.5 -6.0 4.9 93.8 97.5 16.1
 ILE-765   GLU-766  19.6 20.8 4.2 1.7 89.7 90.1 31.3
 GLU-766   GLU-767  19.5 21.1 -0.7 -7.9 22.6 20.2 36.9
 GLU-767   ALA-768  18.6 20.7 40.2 -22.1 118.1 117.0 -47.9
 ALA-768   ARG-769  21.5 23.7 174.5 -2.1 73.7 96.4 15.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees