Interferon-Induced, Double-Stranded Rna- Activated Protein Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-311   LEU-312  0.6 0.6 -0.2 4.3 33.4 32.2 -12.0
 LEU-312   ALA-313  2.0 1.9 7.3 -6.2 81.6 83.6 35.3
 ALA-313   LYS-314  5.5 5.4 -18.0 3.8 112.3 105.0 -23.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-318   ASN-319  9.3 9.3 7.1 -2.4 78.4 77.5 61.2
 ASN-319   ILE-320  7.9 8.1 -5.3 4.7 58.4 57.0 22.2
 ILE-320   VAL-321  4.6 4.8 -0.1 -6.9 113.7 111.1 -2.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-367   PHE-368  4.5 4.7 9.9 -13.8 129.8 125.7 64.1
 PHE-368   CYS-369  4.7 4.8 -9.7 4.7 56.3 55.6 24.5
 CYS-369   ASP-370  1.8 1.7 21.7 -47.1 149.8 143.3 102.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees