Hypothetical Protein Nmb1012

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-14   HIS-15  7.6 7.2 0.1 -5.5 67.3 66.9 -66.1
 HIS-15   GLU-16  4.9 4.5 13.9 -7.6 70.4 68.1 84.9
 GLU-16   GLY-17  6.2 6.0 4.5 -3.9 150.9 150.3 -28.7
 GLY-17   GLY-18  6.3 6.3 -6.7 4.0 70.2 71.6 32.7
 GLY-18   TYR-19  10.1 10.1 -2.6 2.4 62.8 62.3 16.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-53   GLU-54  1.4 1.5 -0.9 -2.9 130.1 128.1 -60.7
 GLU-54   GLN-55  4.3 4.5 7.9 -5.4 29.6 33.3 33.8
 GLN-55   ALA-56  5.1 5.3 3.2 1.6 56.5 55.5 47.9
 ALA-56   ILE-57  1.9 2.1 1.0 0.4 62.3 59.4 -1.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees