Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-108
GLY-109
4.0
2.6
-27.0
35.7
134.9
136.7
23.9
GLY-109
ILE-110
2.9
2.5
-50.9
38.3
60.1
66.2
19.8
ILE-110
SER-111
5.2
4.7
-5.2
-9.6
56.9
64.2
40.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-209
LEU-210
11.5
10.8
4.8
9.2
106.4
115.2
-27.9
LEU-210
ILE-211
8.1
7.6
0.4
11.8
154.8
154.2
-37.7
ILE-211
ASP-212
7.7
7.9
-175.6
152.9
66.6
42.1
-0.3
ASP-212
SER-213
4.9
4.8
131.6
-99.5
74.4
62.1
56.1
SER-213
LYS-214
4.8
4.0
-15.9
13.4
75.3
71.6
28.5
LYS-214
GLY-215
3.5
3.2
29.9
-13.5
42.5
42.7
45.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees