Serine Hydroxymethyltransferase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-123   ILE-124  20.5 20.5 -4.4 4.7 60.2 62.2 153.5
 ILE-124   MET-125  17.9 17.8 12.1 -12.8 103.0 101.1 -63.2
 MET-125   GLY-126  15.7 15.6 -12.3 13.0 36.4 42.2 127.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-131   GLY-132  15.6 15.6 -3.4 2.3 113.4 113.8 -13.2
 GLY-132   GLY-133  13.0 12.9 -9.7 0.1 76.4 76.4 2.3
 GLY-133   HIS-134  13.5 13.2 -17.0 36.9 135.3 131.5 303.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-158   TYR-159  18.0 17.8 -1.2 4.2 119.1 115.7 30.8
 TYR-159   LYS-160  15.7 15.7 0.0 2.2 146.9 146.8 -35.9
 LYS-160   VAL-161  16.2 16.1 3.4 -0.6 91.5 92.2 45.0
 VAL-161   ASN-162  15.0 15.1 -0.4 -1.7 110.3 110.2 -104.0
 ASN-162   SER-163  17.3 17.4 -3.0 -6.6 42.4 35.6 232.2
 SER-163   THR-164  20.6 20.5 9.8 3.4 126.5 119.4 -213.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 CYS-187   GLY-188  8.2 8.3 10.3 -10.9 159.4 156.2 -60.5
 GLY-188   GLY-189  7.4 7.2 2.2 3.8 117.6 119.3 -85.3
 GLY-189   SER-190  9.4 9.1 -5.1 5.4 9.2 7.7 3.2
 SER-190   ALA-191  10.1 10.2 -5.2 -1.8 118.6 118.3 -128.0
 SER-190   ALA-191  10.1 10.2 -5.2 -1.8 118.6 118.3 -128.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-190   ALA-191  10.1 10.2 -5.2 -1.8 118.6 118.3 -128.0
 SER-190   ALA-191  10.1 10.2 -5.2 -1.8 118.6 118.3 -128.0
 ALA-191   TYR-192  10.3 10.4 -3.1 -0.1 52.4 52.7 85.3
 TYR-192   PRO-193  9.0 9.2 -0.4 0.2 111.4 111.9 22.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-320   ASN-321  9.0 8.8 -2.0 1.2 41.6 43.1 20.7
 ASN-321   ALA-322  7.3 7.1 -1.9 1.9 111.5 112.8 15.8
 ALA-322   VAL-323  6.9 6.8 -0.1 0.2 108.1 107.8 44.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-389   ILE-390  11.9 12.0 -0.9 3.0 139.5 137.7 42.2
 ILE-390   GLY-391  9.0 9.1 -1.5 -0.8 66.6 64.9 -28.2
 GLY-391   ALA-392  5.4 5.5 0.8 7.2 48.6 49.0 118.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-399   LEU-400  6.7 6.5 -0.9 2.6 90.3 90.2 -0.6
 LEU-400   VAL-401  5.7 5.5 -1.2 2.9 142.7 142.5 16.2
 VAL-401   GLU-402  8.6 8.5 -3.3 0.0 97.8 97.1 85.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-452   PHE-453  4.7 5.0 -6.1 5.6 41.6 42.3 -4.1
 PHE-453   SER-454  5.2 5.2 -6.2 1.6 63.1 67.7 89.4
 SER-454   ALA-455  2.2 2.3 1.3 -3.1 59.6 58.6 -21.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees