DNA Polymerase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-702
ASP-703
14.9
15.2
-19.0
-31.9
79.2
74.0
172.7
ASP-703
PRO-704
16.7
16.9
5.2
1.4
45.9
70.2
93.5
PRO-704
THR-705
17.5
17.3
-2.4
-8.6
101.0
100.0
-173.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-721
TYR-722
33.8
33.5
-14.5
17.2
149.2
142.4
12.7
TYR-722
PRO-723
33.9
33.3
1.8
-13.2
76.0
80.8
-2.6
PRO-723
SER-724
37.6
37.0
5.7
3.5
128.5
136.3
-28.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-846
ALA-847
22.4
22.0
-0.3
-1.9
133.4
139.2
-38.6
ALA-847
THR-848
25.2
24.7
-3.7
5.7
139.1
136.4
21.5
THR-848
ARG-849
26.1
25.8
-5.2
6.6
123.5
121.4
58.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees