P21-Activated Kinase 4

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-313   PRO-314  8.3 7.1 -0.6 18.2 98.5 101.1 12.5
 PRO-314   GLY-315  12.0 10.8 -34.5 22.9 35.5 34.0 35.7
 GLY-315   ASP-316  15.0 13.7 -40.7 35.0 50.0 53.7 -45.8
 ASP-316   PRO-317  14.5 14.9 -53.5 18.2 33.7 18.7 146.1
 PRO-317   ARG-318  13.1 13.2 15.9 8.4 130.8 129.9 -81.3
 ARG-318   SER-319  16.4 16.7 -59.4 26.6 106.4 77.0 26.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-351   MET-352  14.2 14.4 -56.3 50.5 52.6 62.7 -30.4
 MET-352   ASP-353  16.0 15.8 -56.0 74.8 46.9 43.4 -63.4
 LEU-363   PHE-364  12.6 12.0 -7.3 -22.1 70.5 72.3 0.8
 PHE-364   ASN-365  9.7 9.0 11.9 0.9 59.2 58.7 4.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-379   GLU-380  5.2 6.3 9.9 -9.7 39.1 38.4 4.1
 GLU-380   MET-381  2.3 3.3 3.5 0.5 64.3 65.0 -1.1
 MET-381   TYR-382  1.6 2.2 21.1 -19.3 73.8 76.7 32.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-395   GLU-396  4.5 4.2 12.5 14.7 17.7 16.5 102.0
 GLU-396   PHE-397  2.4 2.5 22.9 8.5 52.7 56.3 69.4
 PHE-397   LEU-398  5.0 4.9 -17.5 28.7 148.4 131.9 19.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees