Trna Nucleotidyl Transferase-Related Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  LYS-371   ASN-372  11.5 10.7 -3.4 25.2 169.0 160.3 95.7  ASN-372   THR-373  11.6 11.0 32.6 -15.3 83.2 83.2 68.2  THR-373   LYS-374  9.2 8.6 18.5 -41.6 114.6 94.5 -83.9 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  LYS-400   ILE-401  5.2 5.3 17.3 -6.2 123.1 125.7 -5.3  ILE-401   LEU-402  3.5 3.4 6.9 -14.5 67.5 63.0 -1.0  LYS-404   LYS-405  5.8 5.8 0.3 -6.5 109.1 107.5 9.3 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees