E8 Antibody

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-126   PRO-127  8.5 8.7 1.0 -1.4 20.3 19.3 0.6
 PRO-127   LEU-128  8.9 8.8 -4.5 9.5 128.9 128.1 65.9
 LEU-128   ALA-129  8.5 8.8 12.9 -4.7 33.4 30.1 72.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-143   CYS-144  4.1 4.5 13.8 -11.8 23.6 22.3 19.1
 CYS-144   LEU-145  4.2 4.5 -10.5 16.5 118.5 123.4 53.0
 LEU-145   VAL-146  5.2 5.6 -7.1 6.6 161.1 154.7 -31.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-148   TYR-149  7.1 7.2 17.3 -9.1 127.2 128.4 -56.2
 TYR-149   PHE-150  4.2 4.3 7.8 -10.4 111.7 111.4 2.0
 PHE-150   PRO-151  5.3 5.5 -0.7 0.3 57.8 54.7 32.7
 PRO-151   GLU-152  6.8 7.0 -16.8 10.5 146.4 141.3 -26.0
 GLU-152   PRO-153  7.9 7.8 0.4 -8.0 110.8 109.8 -51.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-154   THR-155  4.9 5.1 21.1 -9.7 29.7 33.4 102.2
 THR-155   VAL-156  6.4 6.7 -0.2 -0.3 123.2 122.6 -2.1
 VAL-156   THR-157  5.2 5.2 5.0 -2.8 42.4 40.5 49.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-161   SER-162  12.2 12.7 3.7 -9.8 158.6 163.3 9.2
 SER-162   LEU-163  13.6 13.4 13.0 -21.8 132.0 125.2 43.4
 LEU-163   SER-164  10.1 9.8 -8.3 11.0 104.1 109.3 12.1
 SER-164   SER-165  9.9 10.0 10.2 -46.1 133.0 120.7 207.9
 SER-165   GLY-166  8.7 8.1 17.9 7.7 91.3 110.4 -84.3
 GLY-166   VAL-167  5.1 4.6 2.3 -7.7 28.2 31.1 -10.0
 VAL-167   HIS-168  4.5 4.1 0.0 -15.0 106.8 103.0 -93.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-181   THR-182  5.3 5.4 14.2 4.4 50.0 49.6 164.9
 THR-182   SER-183  3.9 3.9 -0.2 4.3 129.6 125.2 30.9
 SER-183   SER-184  1.5 1.4 -5.1 11.4 139.3 141.1 84.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-203   PRO-204  4.4 4.4 -8.6 14.4 146.5 147.5 19.9
 PRO-204   ALA-205  7.4 7.4 0.9 -5.9 25.8 26.4 -33.6
 ALA-205   SER-206  5.6 5.4 14.1 0.5 64.7 68.5 58.8
 SER-206   SER-207  3.6 3.5 -26.3 22.0 81.4 91.7 66.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-211   LYS-212  10.3 10.1 50.9 -52.7 67.2 69.2 -57.1
 LYS-212   LYS-213  9.8 10.3 4.3 2.7 15.6 11.3 49.6
 LYS-213   ILE-214  12.0 12.3 -1.8 4.8 116.0 112.2 -18.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees