Transcription Factor Pap1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-104
GLU-105
6.4
6.4
4.8
-2.4
100.0
102.1
6.2
GLU-105
THR-106
5.5
5.2
6.4
-1.9
148.5
149.1
-4.2
THR-106
GLN-107
4.4
4.3
-11.9
10.1
91.2
95.0
0.5
GLN-107
VAL-108
3.1
3.8
-6.8
10.6
116.6
111.7
21.4
VAL-108
VAL-109
0.2
0.8
-3.7
-2.8
52.5
46.6
12.8
VAL-109
THR-110
2.7
1.6
-4.2
-2.7
47.2
47.8
11.4
THR-110
LEU-111
1.3
1.9
-11.5
12.1
113.1
111.7
1.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees