5'-Nucleotidase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-353   ASN-354  8.1 8.1 13.1 -28.5 81.9 85.3 0.0
 ASN-354   LYS-355  4.7 4.6 30.6 9.5 115.4 106.7 -9.8
 LYS-355   GLY-356  5.4 5.0 166.8 119.4 172.5 144.2 67.5
 GLY-356   LYS-357  5.6 3.2 62.7 8.7 104.5 110.7 -17.9
 LYS-357   ALA-358  2.8 1.3 10.3 1.6 86.4 108.6 -2.1
 ALA-358   GLN-359  1.6 2.8 -12.5 1.1 40.9 18.8 8.1
 GLN-359   LEU-360  4.2 3.1 -7.7 -16.2 32.7 46.7 23.4
 LEU-360   GLU-361  1.5 0.9 -20.4 -8.1 84.6 80.2 9.5
 GLU-361   VAL-362  4.3 4.7 18.1 -0.5 106.7 100.9 -0.8
 VAL-362   LYS-363  6.9 6.3 -9.8 -3.3 16.1 21.3 13.0
 LYS-363   ILE-364  9.0 8.7 4.2 -9.1 119.0 122.9 1.4

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees