Virb11 Homolog

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-133   ILE-134  20.6 20.7 -48.4 18.1 157.6 153.0 -411.3
 ILE-134   PRO-135  18.9 19.6 21.9 -25.9 92.6 93.9 0.4
 PRO-135   SER-136  15.9 15.8 28.8 -50.4 53.7 58.2 -0.9
 SER-136   LYS-137  12.5 13.1 3.1 -8.6 23.5 48.7 -55.9
 LYS-137   THR-138  12.4 11.7 116.3 -76.6 60.7 57.0 394.4
 THR-138   THR-139  10.3 9.1 -14.4 13.5 58.3 55.4 87.9
 THR-139   TYR-140  6.6 5.4 -33.1 42.1 105.0 95.3 -49.9
 TYR-140   PRO-141  6.5 6.1 6.1 -14.5 103.9 95.1 12.4
 PRO-141   HIS-142  4.4 4.8 -19.5 10.3 37.5 33.4 69.5
 HIS-142   SER-143  5.5 5.6 4.9 -8.7 83.4 86.6 -20.3
 SER-143   PHE-144  8.9 9.2 13.7 -8.1 97.0 92.8 42.2

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees