Helix-Destabilizing Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-63   GLU-64  3.3 3.4 -4.8 4.7 126.2 121.2 -10.7
 GLU-64   ALA-65  1.6 1.4 1.3 -6.4 120.2 121.1 41.6
 ALA-65   TYR-66  2.4 2.5 3.0 -0.8 140.4 137.0 -3.2
 TYR-66   ALA-67  2.8 2.8 -1.5 -6.5 109.5 110.9 -28.6
 ALA-67   ALA-68  5.5 5.6 10.0 -3.4 80.0 78.4 29.1
 ALA-68   ALA-69  6.8 6.7 -3.0 -3.2 34.8 34.8 39.7
 ALA-69   VAL-70  7.2 7.4 0.3 8.4 116.3 113.9 -1.3
 VAL-70   GLU-71  8.8 8.7 -13.3 8.4 126.5 119.7 -24.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-77   PRO-78  16.5 16.8 -63.6 37.1 125.8 120.1 -110.7
 TYR-90   GLU-91  4.3 4.5 -1.5 -7.6 64.6 65.0 23.6
 GLU-91   GLY-92  2.2 2.6 -6.4 13.3 133.5 131.1 53.2
 GLY-92   ASP-93  2.9 3.0 -3.9 3.9 74.7 74.4 4.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-155   VAL-156  10.4 10.5 1.7 1.5 103.6 104.8 -6.3
 VAL-156   PRO-157  9.8 9.8 2.9 -12.1 127.7 123.7 82.4
 PRO-157   TYR-158  6.3 6.3 8.8 -7.0 129.8 125.8 -14.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-166   SER-167  2.1 1.7 -3.3 -0.2 69.4 74.2 42.6
 SER-167   VAL-168  3.9 3.8 -2.3 -5.1 45.5 45.1 36.5
 VAL-168   LYS-169  6.9 6.8 -1.3 4.1 111.7 112.1 45.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees