Putative Membrane Antigen

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  LEU-2103   GLU-2104  3.5 3.6 2.0 -16.0 127.2 122.6 63.9  GLU-2104   ARG-2105  4.9 4.3 13.0 -7.1 152.6 158.7 -45.1  ARG-2105   LEU-2106  3.7 3.5 0.2 0.2 86.0 88.4 15.1 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  VAL-2136   ILE-2137  4.9 5.0 7.5 -0.7 77.7 75.0 6.9  ILE-2137   GLY-2138  2.0 2.1 -6.8 1.5 50.7 53.3 44.2  GLY-2138   GLN-2139  4.3 4.0 9.9 -8.4 152.2 148.2 -6.8  GLN-2139   GLY-2140  2.4 2.1 -11.5 5.2 99.6 98.7 -23.3 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees