Transcriptional Regulator, Tetr Family

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-10   GLN-11  6.0 6.2 10.5 -1.7 19.3 18.4 106.0
 GLN-11   LYS-12  6.7 7.2 -9.4 8.4 130.9 129.8 -32.6
 LYS-12   ILE-13  9.3 9.7 -0.8 -2.7 102.0 102.8 -43.1
 ILE-13   VAL-14  7.9 8.1 -2.2 -2.7 46.9 45.3 31.2
 ILE-13   VAL-14  7.9 8.1 -2.2 -2.7 46.9 45.3 31.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-13   VAL-14  7.9 8.1 -2.2 -2.7 46.9 45.3 31.2
 ILE-13   VAL-14  7.9 8.1 -2.2 -2.7 46.9 45.3 31.2
 VAL-14   GLU-15  4.6 4.9 6.5 -4.5 158.4 158.9 -26.8
 GLU-15   THR-16  6.6 6.8 1.4 -1.5 115.3 117.1 -13.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-56   LYS-57  6.6 6.4 3.4 1.5 97.3 99.5 6.9
 LYS-57   ASN-58  5.7 5.5 -3.1 2.4 99.9 100.6 -5.1
 ASN-58   LEU-59  2.0 1.7 -5.7 6.3 163.1 163.1 22.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees