Benzoylformate Decarboxylase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-453   ASN-454  4.1 4.0 -1.4 -0.4 44.9 46.4 17.3
 ASN-454   ASN-455  4.2 4.3 -0.3 0.0 64.9 66.0 -2.9
 ASN-455   GLY-456  6.9 7.0 2.7 -0.8 142.4 142.7 -3.0
 GLY-456   THR-457  6.3 6.4 0.2 -0.1 156.9 158.6 -16.1
 THR-457   TYR-458  4.9 5.0 -1.6 3.9 90.0 88.3 64.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-475   LEU-476  3.3 3.6 3.1 -4.2 138.8 136.9 9.0
 LEU-476   ASP-477  3.6 3.7 7.2 -5.5 153.4 152.9 -35.5
 ASP-477   VAL-478  5.4 5.6 1.3 -1.3 113.8 113.5 3.7
 VAL-478   PRO-479  5.1 5.3 1.5 -3.3 138.0 139.0 3.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees