B-Cell Mitogen

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-125   TYR-126  20.2 20.8 15.5 -11.0 126.7 127.3 -77.8
 TYR-126   LEU-127  19.2 19.3 63.4 40.5 137.5 138.5 -477.1
 LEU-127   ASN-128  16.6 17.0 -19.4 7.2 103.3 31.5 0.5
 ASN-128   MET-129  12.8 17.3 42.0 141.6 65.5 107.6 64.2
 MET-129   CYS-130  12.7 13.4 35.8 141.9 84.3 38.8 526.8
 CYS-130   GLY-131  9.8 10.5 128.3 -131.6 121.2 108.1 66.4
 GLY-131   HIS-132  8.4 7.0 -54.2 -0.7 115.8 129.5 -270.3
 HIS-132   ASN-133  5.8 5.0 -13.4 -8.5 97.6 97.3 -20.8
 ASN-133   SER-134  8.1 7.8 -6.2 5.8 31.3 34.5 66.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-182   ASN-183  10.5 10.4 -2.8 1.8 90.2 92.9 6.8
 ASN-183   ALA-184  6.8 6.7 -0.1 -6.8 44.2 44.5 26.5
 ALA-184   SER-185  4.6 4.8 5.4 -13.5 115.8 112.4 7.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-366   GLY-367  2.7 2.2 -8.6 5.1 8.2 13.1 46.2
 GLY-367   LYS-368  2.6 2.3 13.8 -14.0 112.2 108.6 1.2
 LYS-368   ALA-369  4.2 3.9 10.7 -17.5 135.6 138.8 23.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-390   LEU-391  18.7 18.9 12.3 -7.2 46.0 43.3 41.8
 LEU-391   LYS-392  18.5 18.9 -1.3 -2.4 62.2 64.8 4.7
 LYS-392   GLN-393  18.5 19.3 -0.4 34.7 87.3 87.0 -1.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees