Tena Homolog/thi-4 Thiaminase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-40   LEU-41  8.0 7.9 1.6 -1.3 91.8 100.2 -5.7
 LEU-41   GLN-42  6.8 6.7 -7.9 6.7 51.5 51.5 8.4
 GLN-42   ASP-43  3.4 3.2 -29.1 -6.4 18.0 19.1 238.1
 ASP-43   TYR-44  5.2 4.4 0.4 -8.4 121.9 125.5 7.4
 TYR-44   ASN-45  7.2 7.2 14.8 -2.1 124.5 116.8 -74.6
 ASN-45   TYR-46  5.5 5.9 -2.4 3.3 44.5 42.1 -6.4
 TYR-46   LEU-47  2.5 2.8 8.1 -8.0 145.2 149.1 2.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-57   ALA-58  2.8 2.7 10.7 -4.5 33.2 36.2 54.5
 ALA-58   SER-59  3.8 3.6 4.6 -3.5 51.8 55.3 18.2
 SER-59   ARG-60  6.6 6.5 -3.7 20.1 133.6 131.8 92.3
 ARG-60   ALA-61  5.3 5.0 -23.9 13.2 103.3 114.2 -54.3
 ALA-61   PRO-62  1.7 1.5 -8.8 -10.9 165.9 163.5 -141.1
 PRO-62   SER-63  2.4 2.3 28.2 -27.7 50.4 48.1 29.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-77   VAL-78  9.5 10.0 -0.6 32.9 57.7 58.5 -166.7
 VAL-78   THR-79  11.7 12.2 -62.8 44.9 91.3 77.1 45.1
 THR-79   GLY-80  15.0 15.5 55.6 -29.2 117.3 114.1 -66.3
 GLY-80   GLU-81  15.6 14.9 -43.0 7.2 36.5 20.9 223.9
 GLU-81   MET-82  12.8 12.5 -7.3 -5.2 40.4 57.4 112.8
 MET-82   ALA-83  13.3 12.0 4.7 -7.1 115.0 111.1 12.3
 ALA-83   ASN-84  16.9 15.8 13.5 1.0 134.1 143.1 -82.3
 ASN-84   TYR-85  16.2 16.0 -12.3 5.6 36.7 34.5 36.2
 TYR-85   GLU-86  13.3 13.1 11.8 -0.6 132.0 113.2 -57.6
 GLU-86   ALA-87  15.6 15.3 -7.9 0.7 59.5 56.2 8.0
 ALA-87   LEU-88  18.2 18.1 0.8 -4.4 138.1 148.6 23.1
 LEU-88   LEU-89  15.9 16.0 -1.2 1.1 37.0 48.0 -1.5
 LEU-89   LYS-90  14.7 14.4 -0.4 -1.0 56.8 61.3 -9.0
 LYS-90   GLU-91  18.3 18.0 -5.0 -1.1 52.0 48.2 43.6
 GLU-91   VAL-92  19.0 19.1 0.7 -0.4 145.8 147.9 6.6
 VAL-92   GLY-93  16.0 16.1 2.6 1.2 122.7 119.5 -17.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees