Bone Morphogenetic Protein-7

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-44   VAL-45  3.6 4.1 1.0 2.2 73.5 74.2 9.1
 VAL-45   SER-46  1.8 0.8 -6.2 11.3 83.9 82.4 7.0
 SER-46   PHE-47  2.8 3.0 -1.5 9.8 85.1 79.8 10.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-61   TYR-62  3.1 3.8 3.4 -4.2 50.6 48.6 10.9
 TYR-62   ALA-63  1.3 2.5 -1.4 9.5 61.0 66.5 -1.0
 ALA-63   ALA-64  4.5 5.1 -9.3 17.4 114.3 112.1 38.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-110   ALA-111  7.4 7.0 -10.4 8.0 104.0 108.5 -29.1
 ALA-111   ILE-112  4.5 4.1 0.4 9.9 66.2 63.3 27.9
 ILE-112   SER-113  1.2 0.9 -6.8 -7.6 65.4 62.6 51.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-126   LYS-127  7.9 8.3 -35.7 -14.6 64.6 81.2 127.2
 LYS-127   TYR-128  5.4 5.4 -8.0 1.8 55.8 58.5 -51.1
 TYR-128   ARG-129  6.7 6.2 6.8 -9.7 85.2 81.8 30.6
 ARG-129   ASN-130  7.7 7.1 -4.6 4.7 33.0 39.9 -6.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees