Elongation Factor 2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-104   SER-105  11.7 11.7 10.3 -6.2 32.0 28.2 13.4
 SER-105   PRO-106  13.6 13.3 5.4 -7.9 104.8 105.2 18.1
 PRO-106   GLY-107  15.2 15.1 -160.0 161.8 91.1 96.4 8.0
 GLY-107   HIS-108  18.7 18.7 -29.4 -59.2 121.1 118.0 -179.7
 HIS-108   VAL-109  20.1 20.4 9.2 -29.7 8.6 71.6 -85.2
 VAL-109   ASP-110  20.9 18.6 11.7 96.6 54.1 19.0 330.9
 ASP-110   PHE-111  22.5 19.5 116.2 -84.5 44.8 54.9 137.9
 PHE-111   SER-112  19.2 18.9 -145.4 -34.3 85.4 100.4 -293.1
 SER-112   SER-113  16.8 15.6 -69.2 -97.7 100.6 84.7 -112.9
 SER-113   GLU-114  13.2 12.8 -43.9 1.3 35.5 32.3 152.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-477   MET-478  2.7 2.7 12.9 -22.6 95.8 95.1 5.9
 MET-478   LYS-479  3.1 2.8 -6.9 16.8 96.2 88.2 7.7
 LYS-479   VAL-480  4.2 4.2 -14.9 4.4 57.6 55.9 48.0
 VAL-480   MET-481  4.5 4.0 8.2 -40.5 82.9 91.4 23.5
 MET-481   LYS-482  8.2 7.5 0.1 8.8 41.0 72.0 29.0
 LYS-482   PHE-483  10.4 10.1 14.9 18.1 114.1 128.8 -46.7
 PHE-483   SER-484  13.3 12.7 29.4 -56.3 45.9 63.7 -10.9
 SER-484   VAL-485  16.7 16.5 -24.4 2.4 97.1 80.8 37.8
 VAL-485   SER-486  17.5 17.5 -10.9 20.9 115.5 110.9 30.8
 SER-486   PRO-487  21.0 20.9 11.0 -1.0 136.9 138.6 -51.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees