D-Lactate Dehydrogenase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-8
ILE-9
9.3
9.2
5.5
-2.1
36.7
36.4
134.2
ILE-9
ARG-10
7.3
7.3
-1.6
0.3
147.6
149.7
-122.4
ARG-10
GLU-11
7.9
7.8
4.0
-2.3
44.0
43.4
4.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLU-13
LYS-14
2.9
2.7
-0.5
-1.2
86.6
86.5
35.7
LYS-14
PRO-15
5.3
5.1
1.1
0.7
112.8
111.6
-10.8
PRO-15
PHE-16
4.5
4.4
-1.5
-4.3
128.2
129.7
-115.0
PHE-16
LEU-17
3.8
3.8
11.0
-14.8
37.7
34.9
36.6
LEU-17
LYS-18
5.4
5.4
6.9
1.3
107.1
107.2
18.4
LEU-17
LYS-18
5.4
5.4
6.9
1.3
107.1
107.2
18.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-17
LYS-18
5.4
5.4
6.9
1.3
107.1
107.2
18.4
LEU-17
LYS-18
5.4
5.4
6.9
1.3
107.1
107.2
18.4
LYS-18
GLU-19
8.4
8.4
2.2
-7.4
89.0
88.5
90.8
GLU-19
TRP-20
8.6
8.7
2.9
0.5
23.6
24.4
9.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASN-98
VAL-99
7.1
7.0
6.8
-3.9
40.4
41.5
28.3
VAL-99
PRO-100
8.5
8.5
0.1
-6.3
75.3
75.0
-38.6
PRO-100
VAL-101
12.2
12.3
11.6
-1.1
23.4
29.4
236.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ARG-307
ASN-308
4.3
4.3
0.5
-0.1
30.6
31.3
3.9
ASN-308
MET-309
6.9
6.9
-7.9
11.2
143.0
143.4
77.4
MET-309
VAL-310
5.1
5.1
-5.0
2.5
108.8
106.5
-79.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-326
GLU-327
10.4
10.4
-0.4
8.1
121.3
120.0
179.7
GLU-327
THR-328
12.0
12.0
1.2
-3.2
98.5
101.3
119.4
THR-328
PRO-329
10.9
10.9
-0.7
-2.3
47.6
50.5
35.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees