Jumonji Domain-Containing Protein 2A

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-923   THR-924  7.3 7.4 -26.7 26.0 43.9 53.5 -23.7
 THR-924   GLU-925  4.9 4.7 0.4 19.2 77.2 68.8 10.7
 GLU-925   THR-926  1.2 1.1 -5.9 -18.8 43.9 37.9 95.2
 THR-926   PHE-927  1.8 1.9 -19.2 23.2 114.3 105.9 -7.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-979   SER-980  8.3 8.3 -3.1 -3.2 31.4 29.1 26.8
 SER-980   HIS-981  5.4 5.6 0.4 9.3 89.6 84.6 5.0
 HIS-981   PRO-982  3.9 3.8 -4.8 -2.1 50.0 51.0 17.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees