Hypothetical Upf0244 Protein Vc0702

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-115   PRO-116  4.1 3.6 -7.1 1.2 105.1 100.2 1.7
 PRO-116   PRO-117  6.6 6.0 -4.4 -0.7 173.0 172.5 -30.4
 PRO-117   LEU-118  8.2 7.7 4.2 4.8 57.0 65.9 23.8
 LEU-118   VAL-119  8.1 8.1 2.1 -10.9 82.7 76.1 -7.0
 VAL-119   LEU-120  4.6 4.7 0.4 1.3 43.9 41.6 16.0
 LEU-120   GLU-121  3.6 3.3 3.5 2.1 25.8 23.5 25.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-147   ALA-148  7.2 7.0 9.8 0.5 95.3 99.2 20.0
 ALA-148   ILE-149  4.2 3.9 4.5 6.3 45.5 44.9 66.9
 ILE-149   GLY-150  1.8 2.1 -1.3 -5.2 150.0 144.5 -39.8
 GLY-150   LEU-151  3.9 3.8 -4.8 4.9 87.6 83.3 -10.6
 LEU-151   LEU-152  5.5 5.3 2.0 -5.8 87.2 91.1 5.4
 LEU-152   THR-153  4.0 3.8 -2.9 10.5 146.3 143.9 8.9
 THR-153   ARG-154  2.9 2.8 -6.2 -4.4 144.6 141.5 -60.1
 ARG-154   HIS-155  5.0 4.8 -0.4 2.7 125.2 134.9 26.4
 HIS-155   HIS-156  3.6 3.1 7.1 0.1 57.7 51.1 35.1
 HIS-156   LEU-157  0.2 0.5 2.3 -3.7 115.1 110.1 5.6
 LEU-157   THR-158  2.9 2.8 2.4 2.4 125.0 118.9 -9.6
 THR-158   ARG-159  5.1 5.1 0.2 -4.8 127.4 132.2 37.7
 ARG-159   SER-160  7.1 7.3 -0.7 7.0 120.8 118.9 -2.6
 SER-160   THR-161  10.1 10.2 -9.5 7.5 131.5 120.0 -12.7
 THR-161   VAL-162  9.0 9.0 0.0 -12.7 63.1 56.6 11.2
 VAL-162   TYR-163  8.8 8.9 3.9 8.8 111.1 114.6 -11.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees