Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-33   SER-34  4.0 5.2 -6.2 -9.0 107.3 107.0 43.2
 SER-34   GLN-35  6.4 7.6 -7.1 16.5 80.2 91.5 0.7
 GLN-35   ASN-36  8.4 9.2 9.8 -22.6 64.1 59.1 -1.9
 ASN-36   THR-37  11.7 12.2 17.0 9.5 45.7 53.2 35.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-91   LYS-92  7.5 6.5 19.1 -7.2 101.2 104.6 -44.7
 LYS-92   ARG-93  5.0 4.2 8.1 -4.2 66.7 65.2 -13.0
 ARG-93   ILE-94  2.4 1.6 0.2 3.1 121.1 121.1 5.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-104   LYS-105  3.3 2.7 -1.9 -3.5 46.1 51.1 24.0
 LYS-105   LEU-106  0.4 1.2 0.0 -11.4 112.1 113.4 -15.3
 LEU-106   GLU-107  2.7 2.8 -23.7 28.5 94.0 89.7 28.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-121   TYR-122  3.9 3.4 -9.3 -2.8 59.3 53.1 11.8
 TYR-122   VAL-123  5.7 5.0 14.2 -24.5 127.0 133.4 22.1
 VAL-123   ALA-124  4.7 4.3 29.7 -8.2 136.6 124.6 51.9
 ALA-124   GLY-125  6.3 6.5 -10.2 41.9 57.3 76.4 -60.9
 GLY-125   GLY-126  7.4 7.5 -68.8 33.0 104.6 98.5 7.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-315   PRO-316  7.0 7.4 2.3 -10.8 80.8 78.7 -3.9
 PRO-316   LYS-317  7.1 7.9 -3.3 15.8 126.6 114.3 63.3
 LYS-317   PHE-318  6.6 7.2 5.5 67.3 127.7 128.5 -217.0
 ASP-329   TYR-330  20.2 24.8 -93.9 24.5 34.5 30.2 323.5
 TYR-330   GLU-331  21.7 23.5 -31.8 -6.4 83.0 42.5 24.1
 GLU-331   GLU-332  24.7 25.1 64.4 -62.6 128.4 141.5 18.5
 GLU-332   GLU-333  23.8 25.2 22.8 -23.3 139.9 148.8 -14.5
 GLU-333   GLU-334  25.1 24.7 9.3 -33.3 112.8 136.1 56.4
 GLU-334   ILE-335  25.6 25.6 25.0 -49.3 142.0 125.9 97.1
 ILE-335   ARG-336  22.9 23.4 -12.9 4.8 49.6 28.6 34.7
 ARG-336   VAL-337  25.1 25.0 -48.8 32.4 44.4 43.5 20.5
 ILE-339   ASN-340  27.4 27.6 -39.2 -6.2 26.3 33.0 208.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees