Histidyl-Trna Synthetase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-214   GLN-215  5.7 5.7 12.7 8.7 65.3 57.7 -0.3
 GLN-215   THR-216  8.2 8.0 -7.6 6.3 90.1 81.2 12.0
 THR-216   VAL-217  10.2 10.2 -9.0 -7.8 25.1 24.6 37.9
 VAL-217   VAL-218  10.5 10.3 -5.2 6.1 80.3 85.3 18.2
 VAL-218   GLU-219  12.2 11.6 -150.5 112.0 126.1 120.9 -120.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-247   ALA-248  12.0 11.3 -8.9 15.0 89.0 86.6 21.1
 ALA-248   GLN-249  15.3 14.9 -18.5 16.0 155.7 153.5 -5.5
 GLN-249   LEU-250  15.2 15.6 -7.5 18.1 131.8 127.0 36.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-265   THR-266  4.9 5.3 -40.1 20.2 40.3 36.8 41.9
 THR-266   LEU-267  5.0 4.8 -1.3 -8.4 77.6 83.5 -24.6
 LEU-267   SER-268  1.3 1.0 18.0 -14.5 63.7 56.9 49.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees