Glycosyltransferase Gtfa

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-182   PRO-183  1.0 0.9 -5.0 -6.2 26.8 32.2 66.1
 PRO-183   VAL-184  3.2 3.5 22.2 -19.0 125.9 123.6 -17.2
 VAL-184   LEU-185  5.4 5.3 1.5 -0.5 120.4 123.5 -15.2
 LEU-185   SER-186  4.5 4.2 13.2 -7.9 124.0 124.7 -47.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TRP-201   ILE-202  4.6 4.5 -0.8 -3.2 110.6 103.8 -22.1
 ILE-202   LEU-203  5.3 5.8 5.6 18.7 0.9 2.7 173.1
 LEU-203   PRO-204  6.6 7.2 26.9 -13.0 72.4 72.7 10.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-370   ILE-371  10.2 11.1 -0.7 -11.6 81.0 79.4 53.1
 ILE-371   ARG-372  7.0 7.8 4.9 -11.6 140.3 153.4 14.2
 ARG-372   ALA-373  4.7 5.6 22.4 -27.0 139.7 123.3 56.0
 ALA-373   ASP-374  3.9 3.9 9.3 1.2 121.1 126.5 -18.8
 ASP-374   GLY-375  3.0 3.0 5.6 -0.2 63.7 64.8 13.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees