Lysozyme (E.C.3.2.1.17)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-2   ILE-3  7.6 10.0 -4.2 -1.5 111.4 97.6 -52.9
 ILE-3   PHE-4  4.0 6.1 4.5 -6.5 7.5 29.0 25.5
 PHE-4   GLU-5  4.2 4.8 17.4 -10.0 69.9 60.8 -3.6
 GLU-5   ILE-6  6.9 7.5 0.8 -1.6 105.4 114.3 42.4
 ILE-6   LEU-7  6.6 7.5 3.1 -3.1 55.4 74.8 -37.6
 LEU-7   ARG-8  4.2 4.6 0.8 20.0 10.0 12.1 85.8
 ARG-8   ILE-9  4.7 5.0 -11.5 -5.2 94.8 100.9 -59.3
 ILE-9   ASP-10  8.4 8.6 10.0 -7.4 96.9 109.2 6.3
 ASP-10   GLU-11  8.5 8.6 -10.7 18.5 131.8 118.7 37.6
 GLU-11   GLY-12  7.0 6.8 -12.2 4.9 169.5 172.3 -55.7
 GLY-12   LEU-13  6.4 6.3 -20.6 15.1 108.0 108.6 11.1
 LEU-13   ARG-14  3.3 3.0 8.8 10.2 19.3 23.3 55.4
 ARG-14   LEU-15  3.4 3.2 -1.1 -5.7 108.8 108.1 15.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-72   ALA-73  8.0 7.9 1.3 -5.5 68.0 75.1 0.2
 ALA-73   ALA-74  9.9 9.6 6.0 -5.3 54.1 63.3 -21.1
 ALA-74   VAL-75  7.4 7.3 30.5 -22.4 24.6 13.9 48.3
 VAL-75   ARG-76  6.3 6.4 -1.1 11.7 117.6 121.7 9.9
 ARG-76   GLY-77  10.0 10.0 -16.6 0.3 108.1 102.7 -26.0
 GLY-77   ILE-78  10.6 10.9 12.3 -2.6 24.2 40.3 42.2
 ILE-78   LEU-79  8.2 8.4 5.2 -14.2 40.9 26.8 -35.5
 LEU-79   ARG-80  9.1 9.2 30.5 -21.9 69.1 73.2 7.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees