Adenosylhomocysteinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-166   SER-167  8.5 8.9 -45.1 68.0 121.2 130.6 35.3
 SER-167   LYS-168  5.0 5.4 48.3 -9.0 105.1 81.3 -87.5
 LYS-168   MET-169  5.1 4.1 7.0 -37.5 139.2 149.8 186.5
 MET-169   LYS-170  2.7 3.5 50.5 1.5 154.5 140.9 -339.6
 LYS-170   TYR-171  3.9 6.2 39.5 -18.1 99.5 101.9 -70.0
 TYR-171   LEU-172  7.4 7.9 15.0 -20.0 106.7 134.8 20.9
 LEU-172   PHE-173  7.2 6.2 21.4 14.7 160.2 153.6 -266.1
 PHE-173   ASP-174  5.3 5.4 -13.7 -8.3 42.9 65.8 127.0
 ASP-174   ASN-175  5.4 9.2 79.0 -1.3 96.7 88.2 71.6
 ASN-175   ARG-176  9.1 10.5 -151.9 25.8 83.7 30.3 491.6
 ARG-176   TYR-177  10.5 13.2 51.7 -26.4 137.0 129.5 -165.5
 TYR-177   GLY-178  9.9 11.1 25.6 -23.1 150.4 104.3 -47.5
 GLY-178   THR-179  7.3 7.9 -26.1 -11.9 52.3 44.8 175.6
 THR-179   GLY-180  9.4 9.2 -13.6 14.7 80.1 64.4 27.6
 GLY-180   GLN-181  12.2 12.6 -5.8 0.9 35.4 28.6 46.4
 GLN-181   SER-182  11.4 12.0 19.2 -8.8 146.0 138.3 -89.3
 SER-182   THR-183  9.1 9.1 -6.5 6.4 65.2 62.5 -5.5
 THR-183   TRP-184  12.1 11.9 -7.4 7.4 55.1 51.1 -11.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-335   GLY-336  3.5 3.7 -11.1 3.8 27.6 25.6 31.6
 GLY-336   HIS-337  4.4 4.7 59.3 -66.1 126.4 141.3 86.7
 HIS-337   PRO-338  3.9 3.9 -5.4 -2.0 104.1 99.4 32.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees