Peroxisomal Hydratase-Dehydrogenase-Epimerase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-60   LYS-61  19.8 19.9 -41.8 26.9 51.6 53.4 -104.1
 LYS-61   LEU-62  20.7 21.1 -0.7 23.2 114.4 120.1 431.2
 LEU-62   LEU-63  22.4 21.9 -9.5 -14.9 131.9 139.3 -227.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-77   LEU-78  3.8 3.5 1.2 -4.6 33.6 30.8 -24.6
 LEU-78   LYS-79  1.1 1.0 0.2 -2.5 91.9 91.6 11.1
 LYS-79   VAL-80  4.0 4.1 -0.1 4.8 139.4 140.3 69.3
 VAL-80   HIS-81  5.8 6.0 12.9 -11.2 72.2 72.0 -29.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-84   PRO-85  12.9 12.9 -6.0 -2.3 129.1 141.8 -106.6
 PRO-85   PRO-86  10.1 10.2 11.7 5.2 56.7 54.3 129.1
 PRO-86   THR-87  11.6 11.7 4.5 -3.3 103.6 105.8 -70.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-96   PRO-97  11.9 11.9 2.9 2.7 25.4 23.4 95.2
 PRO-97   ILE-98  14.5 14.4 2.1 -0.2 58.9 68.3 -45.8
 ILE-98   ALA-99  14.6 14.4 1.0 13.8 56.9 58.8 124.7
 ALA-99   THR-100  17.5 17.2 -8.9 19.1 104.3 102.3 8.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-152   GLN-153  9.9 9.9 4.0 1.9 123.9 123.8 -73.5
 GLN-153   PHE-154  9.0 9.2 -7.0 5.9 60.2 60.8 4.6
 PHE-154   LEU-155  6.6 6.6 -6.6 7.2 27.0 30.2 17.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees