Sortase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-118   GLY-119  7.9 8.2 -6.4 10.5 150.1 150.9 20.6
 GLY-119   HIS-120  5.5 5.6 -3.9 -9.9 78.1 76.6 29.9
 HIS-120   THR-121  3.7 4.0 -2.9 13.4 97.1 96.3 11.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-125   PRO-126  5.9 5.7 14.8 5.6 90.0 64.9 13.3
 PRO-126   ASN-127  5.2 5.7 -175.2 -174.0 67.1 85.3 3.3
 ASN-127   TYR-128  3.0 3.0 15.4 -1.5 87.5 87.0 23.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-182   THR-183  6.1 6.1 -11.3 14.1 126.8 125.4 48.3
 THR-183   ALA-184  2.5 2.6 -0.3 2.3 64.7 56.7 7.9
 ALA-184   ASP-185  3.4 3.9 12.2 -2.6 65.2 72.3 33.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-196   ARG-197  3.8 4.0 8.9 -17.4 109.3 113.6 40.7
 ARG-197   LYS-198  1.4 1.5 15.8 -5.6 80.9 81.7 54.2
 LYS-198   ILE-199  2.9 3.0 -18.4 14.5 78.6 78.3 30.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees