Nucleotide Exchange Factor Grpe
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-83
HIS-84
4.7
4.1
-8.6
-3.5
116.0
118.6
2.3
HIS-84
LYS-85
6.2
5.5
-4.9
12.2
131.1
145.5
18.6
LYS-85
PHE-86
3.6
3.7
2.9
48.4
114.2
108.2
-38.8
PHE-86
ALA-87
0.9
0.7
-80.3
-6.8
26.1
75.9
158.7
ALA-87
LEU-88
3.3
4.0
22.0
12.4
95.2
34.4
34.9
LEU-88
GLU-89
5.6
5.5
-22.5
-35.0
103.3
118.7
-79.1
GLU-89
LYS-90
4.7
4.0
6.6
-2.8
131.1
116.6
3.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees