Sec1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-294   VAL-295  16.2 16.2 27.4 -17.3 53.9 46.3 13.3
 VAL-295   VAL-296  13.4 13.6 8.5 -11.8 102.2 93.8 4.1
 VAL-296   SER-297  10.5 10.3 23.5 -20.8 92.0 90.1 5.8
 SER-297   GLN-298  8.8 9.3 -2.5 -1.3 150.4 147.2 -6.6
 GLN-298   ASN-299  10.4 11.4 17.6 -4.9 49.1 42.1 15.1
 ASN-299   VAL-300  8.2 9.1 -1.0 2.1 71.2 82.1 -0.8
 VAL-300   THR-301  5.2 6.0 12.6 -19.2 76.3 65.0 0.4
 THR-301   LYS-302  5.8 8.0 1.2 0.7 8.6 13.9 2.3
 LYS-302   LYS-303  6.4 9.0 8.0 -27.0 70.8 56.4 -9.1
 LYS-303   LEU-304  2.7 5.3 7.5 -16.3 104.2 102.8 6.2
 LEU-304   LYS-305  3.3 5.5 24.1 -18.4 43.2 58.8 12.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-343   THR-344  1.5 1.7 -19.9 -2.2 121.1 126.1 -25.4
 THR-344   HIS-345  2.2 1.7 -3.1 5.7 69.5 73.9 -1.5
 HIS-345   LEU-346  3.9 3.9 3.8 -4.5 77.2 78.6 4.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees