Dnak Suppressor Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-66   ALA-67  11.0 11.1 0.0 1.6 34.8 34.5 7.9
 ALA-67   ASN-68  12.1 12.2 -0.9 -3.0 117.7 118.3 23.3
 ASN-68   PHE-69  15.7 15.8 2.2 -9.0 71.1 77.5 121.0
 PHE-69   PRO-70  16.2 16.2 10.7 0.9 90.9 85.5 40.4
 PRO-70   ASP-71  19.4 19.3 -1.9 -1.2 148.0 151.7 -61.0
 ASP-71   PRO-72  22.0 21.6 0.1 0.8 96.0 95.1 10.2
 PRO-72   VAL-73  22.1 21.5 -0.9 -0.6 47.7 52.6 31.7
 VAL-73   ASP-74  25.3 24.9 0.2 -0.6 164.8 169.5 26.5
 ASP-74   ARG-75  23.7 23.5 1.2 2.7 103.1 107.7 -79.8
 ARG-75   ALA-76  20.6 20.3 29.5 -23.3 142.2 143.8 -115.0
 ALA-76   ALA-77  22.2 22.4 -6.7 0.1 31.0 29.5 107.7
 ALA-77   GLN-78  22.6 22.9 0.0 0.3 108.3 108.5 -3.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-106   GLU-107  3.7 3.5 0.7 -0.6 80.0 80.6 -0.1
 GLU-107   ASP-108  6.1 6.0 0.5 0.6 47.8 50.1 58.0
 ASP-108   GLU-109  5.2 5.3 -1.4 2.4 155.1 155.9 3.5
 GLU-109   ASP-110  3.6 3.5 12.4 -14.8 73.5 74.0 82.9
 ASP-110   PHE-111  1.5 1.5 3.4 -1.8 109.7 112.4 46.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees