Glutamate Receptor, Ionotropic Kainate 3
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-109
LEU-110
4.5
4.3
1.6
-2.8
48.6
45.0
-0.3
LEU-110
GLY-111
1.2
0.9
-13.8
-14.3
63.5
60.9
76.1
GLY-111
VAL-112
2.9
2.9
6.8
6.0
42.3
45.2
26.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-212
ASP-213
8.6
8.4
29.2
-16.7
33.0
40.4
64.0
ASP-213
SER-214
5.9
5.7
-1.8
-10.9
80.5
82.9
21.1
SER-214
LYS-215
2.3
2.0
-17.7
29.2
94.2
92.5
-3.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LYS-250
TRP-251
14.0
13.9
-5.2
5.5
121.6
122.1
-23.7
TRP-251
TRP-252
11.0
10.9
-2.8
-5.7
97.9
100.0
11.5
TRP-252
ARG-253
8.3
8.2
-13.4
-52.4
127.8
120.6
-145.3
ARG-253
GLY-254
10.5
10.8
-156.9
30.6
157.5
132.2
-627.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees