D-3-Phosphoglycerate Dehydrogenase (Phosphoglycerate 3 Dehydrogenase) (E.C.1.1.1.95)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-104   PRO-105  5.1 5.1 12.8 -43.1 67.7 63.3 -86.0
 PRO-105   PHE-106  8.5 8.3 34.3 -14.6 21.7 34.2 123.7
 PHE-106   SER-107  8.7 8.0 -5.8 -7.9 118.7 114.6 -127.3
 SER-107   ASN-108  5.2 4.5 26.0 -0.1 9.9 5.0 232.1
 ASN-108   THR-109  5.6 5.5 -9.5 3.7 127.2 121.6 -4.0
 THR-109   ARG-110  8.8 8.7 -1.2 -5.6 153.6 159.3 -29.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-297   GLN-298  3.1 3.0 26.3 -19.2 52.0 50.5 65.1
 GLN-298   GLU-299  4.2 3.9 24.0 -12.4 50.7 55.1 65.5
 GLU-299   ALA-300  2.7 2.3 -0.4 8.7 139.8 143.2 70.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees