Sugar Transport Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-130   GLY-131  3.8 3.6 -7.6 -1.3 74.4 73.1 9.2
 GLY-131   THR-132  1.0 0.5 -5.9 -2.8 46.7 49.7 29.2
 THR-132   PRO-133  3.0 2.6 8.9 -5.3 61.1 62.1 1.5
 PRO-133   LYS-134  6.7 6.3 0.6 -4.7 75.7 75.9 -3.9
 LYS-134   GLN-135  7.8 7.5 5.5 -1.3 33.0 37.0 13.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-263   GLY-264  5.4 5.5 -9.5 -2.6 129.3 127.1 -24.0
 GLY-264   LEU-265  3.3 3.2 13.8 -15.0 77.7 71.0 48.8
 LEU-265   TRP-266  2.1 2.0 -0.1 13.0 120.9 113.5 58.7
 TRP-266   ASP-267  3.3 3.2 1.1 -1.6 112.8 118.8 10.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-327   VAL-328  3.0 3.4 15.8 2.3 30.8 22.5 62.8
 VAL-328   ILE-329  3.3 3.4 1.3 -9.3 62.0 62.3 1.6
 ILE-329   PHE-330  4.2 4.3 -6.0 4.6 157.5 159.6 -10.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees