Hemoglobin Delta Chain

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TRP-15   GLY-16  10.5 11.0 -4.6 20.2 66.1 61.3 -121.4
 GLY-16   LYS-17  13.9 14.3 -0.7 -6.6 24.7 24.9 79.1
 LYS-17   VAL-18  12.3 12.5 3.8 -18.7 85.2 89.5 12.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-64   LYS-65  17.3 17.8 -3.1 3.6 91.7 93.8 8.6
 LYS-65   LYS-66  18.0 18.9 -10.4 8.4 23.9 24.7 34.1
 LYS-66   VAL-67  18.8 20.0 -14.5 0.4 63.1 57.4 92.8
 VAL-67   LEU-68  15.4 16.7 -1.3 -12.3 102.8 106.7 20.9
 LEU-68   GLY-69  13.7 14.4 11.0 -2.3 120.3 94.5 7.0
 GLY-69   ALA-70  16.3 17.1 -3.8 -0.2 25.9 24.7 112.4
 ALA-70   PHE-71  14.7 16.4 5.8 -1.4 85.3 94.7 -75.8
 PHE-71   SER-72  11.3 12.7 -3.1 6.0 97.2 112.4 -20.3
 SER-72   ASP-73  13.3 13.8 -7.8 -2.2 30.6 53.8 99.3
 ASP-73   GLY-74  14.9 16.5 -2.5 1.1 59.9 45.7 -18.6
 GLY-74   LEU-75  11.4 13.8 12.8 3.5 68.2 74.1 58.3
 LEU-75   ALA-76  11.4 12.2 10.1 6.5 104.9 95.3 26.6
 ALA-76   HIS-77  14.9 15.7 4.2 11.1 166.1 158.3 -309.5
 HIS-77   LEU-78  14.0 15.0 17.1 -26.9 108.8 114.3 72.3
 LEU-78   ASP-79  10.6 12.1 -2.6 35.7 19.3 25.4 -486.4
 ASP-79   ASN-80  11.7 13.2 -36.3 -2.4 47.7 45.6 431.3
 ASN-80   LEU-81  12.4 11.7 27.8 5.6 65.9 66.9 233.2
 LEU-81   LYS-82  10.1 10.1 5.2 14.9 128.3 130.0 -116.7
 LYS-82   GLY-83  10.2 9.5 -11.9 6.8 76.8 74.0 18.5
 GLY-83   THR-84  13.8 13.1 -5.5 7.5 145.9 138.5 35.2
 THR-84   PHE-85  14.5 14.4 -10.0 14.2 100.9 99.5 23.6
 PHE-85   SER-86  13.5 13.4 -3.9 2.2 36.1 35.6 -43.3
 SER-86   GLN-87  14.6 14.2 -6.6 6.9 99.3 92.6 -7.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-111   CYS-112  3.8 3.6 -6.6 9.2 25.0 26.4 -5.0
 CYS-112   VAL-113  5.8 5.8 -2.2 -3.8 44.0 44.7 95.4
 VAL-113   LEU-114  7.0 6.6 1.9 -2.1 108.3 106.7 -5.8
 LEU-114   ALA-115  4.4 3.9 3.4 4.2 129.5 129.3 -76.8
 ALA-115   ARG-116  1.9 1.7 -11.6 15.5 24.5 24.3 -35.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-128   ALA-129  5.7 6.0 -2.3 7.9 56.4 57.3 -62.3
 ALA-129   TYR-130  5.7 6.1 3.4 -4.1 98.1 96.8 -9.0
 TYR-130   GLN-131  2.9 3.0 -5.2 10.7 50.1 51.0 -20.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees