Putative Transcriptional Regulator

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-80   GLU-81  13.9 14.7 1.4 2.6 118.9 109.2 197.9
 GLU-81   LEU-82  11.9 12.3 -13.3 18.0 113.5 120.9 -197.3
 LEU-82   GLY-83  12.7 13.3 -138.7 -144.9 141.5 142.7 43.5
 GLY-83   TYR-84  9.5 11.8 -21.7 -1.4 123.1 75.1 2.4
 TYR-84   SER-85  9.7 9.0 13.5 15.0 85.6 104.6 11.7
 SER-85   TYR-86  7.2 8.1 -29.7 44.5 109.3 145.7 9.7
 TYR-86   LEU-87  4.2 7.8 -16.4 4.6 152.8 108.0 -5.6
 LEU-87   SER-88  6.2 5.5 -9.8 13.4 133.2 57.2 1.4
 SER-88   SER-89  6.8 3.3 -34.1 24.6 102.7 100.6 -4.7
 SER-89   LEU-90  3.7 4.1 -18.7 -19.3 123.2 153.3 -22.6
 LEU-90   SER-91  1.8 2.8 -161.0 156.1 147.2 92.1 0.7
 SER-91   LEU-92  0.8 1.6 140.9 2.3 39.2 50.1 59.9
 LEU-92   PRO-93  1.2 2.5 4.6 7.1 93.8 99.0 -1.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees