Carboxypeptidase 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-202   GLY-203  3.6 3.8 -38.6 28.1 46.1 37.8 135.6
 GLY-203   LYS-204  3.3 3.4 -26.6 22.3 96.5 94.6 -12.6
 LYS-204   ARG-205  2.7 2.3 24.8 -17.8 54.2 53.7 59.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-300   SER-301  1.7 1.4 10.2 -4.4 67.8 64.6 58.5
 SER-301   LEU-302  2.2 2.3 3.3 2.8 40.7 38.9 50.5
 LEU-302   GLY-303  3.7 4.0 -12.1 2.8 145.8 144.9 -67.8
 GLY-303   VAL-304  3.1 3.1 2.9 -0.6 100.8 94.1 20.5
 GLY-303   VAL-304  3.1 3.1 2.9 -0.6 100.8 94.1 20.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-303   VAL-304  3.1 3.1 2.9 -0.6 100.8 94.1 20.5
 GLY-303   VAL-304  3.1 3.1 2.9 -0.6 100.8 94.1 20.5
 VAL-304   HIS-305  1.7 1.6 2.1 -5.3 100.7 98.6 34.1
 HIS-305   GLU-306  2.5 2.6 8.5 -4.8 167.3 165.8 -34.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-351   VAL-352  3.4 3.9 26.8 -30.6 136.5 141.5 5.3
 VAL-352   GLU-353  0.6 1.0 24.8 -1.8 77.8 74.9 50.7
 GLU-353   PRO-354  4.3 4.1 -27.3 11.3 35.2 39.6 110.8
 PRO-354   SER-355  6.9 6.5 13.2 -32.0 84.6 87.4 14.9
 ALA-351   VAL-352  6.4 6.2 26.8 -30.6 115.8 121.1 -11.7
 VAL-352   GLU-353  5.3 5.4 24.8 -1.8 65.4 64.7 71.6
 GLU-353   PRO-354  9.0 8.9 -27.3 11.3 42.5 54.6 84.8
 ALA-351   VAL-352  3.4 3.9 26.8 -30.6 136.5 141.5 5.3
 VAL-352   GLU-353  0.6 1.0 24.8 -1.8 77.8 74.9 50.7
 GLU-353   PRO-354  4.3 4.1 -27.3 11.3 35.2 39.6 110.8
 PRO-354   SER-355  6.9 6.5 13.2 -32.0 84.6 87.4 14.9
 ASN-350   ALA-351  6.0 5.9 -2.3 10.0 126.5 122.4 54.4
 ALA-351   VAL-352  6.4 6.2 26.8 -30.6 115.8 121.1 -11.7
 VAL-352   GLU-353  5.3 5.4 24.8 -1.8 65.4 64.7 71.6
 GLU-353   PRO-354  9.0 8.9 -27.3 11.3 42.5 54.6 84.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-434   LEU-435  2.1 2.3 10.4 -4.4 89.3 92.2 -52.3
 LEU-435   TYR-436  5.8 5.9 -2.6 9.9 128.3 124.7 38.1
 TYR-436   ALA-437  5.7 5.8 -9.6 7.0 68.5 66.5 10.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-489   GLU-490  17.8 17.8 9.8 -13.7 74.1 75.6 -4.6
 GLU-490   ALA-491  16.7 16.7 0.5 5.2 114.6 108.2 0.9
 ALA-491   PRO-492  15.1 15.0 -1.9 7.6 131.0 136.9 39.0
 PRO-492   SER-493  11.9 11.9 -7.9 8.4 137.8 144.5 23.5
 SER-493   ALA-494  12.5 12.7 9.6 -11.8 45.8 45.9 -30.2
 ALA-494   ARG-495  10.9 11.0 -18.3 24.8 144.8 136.8 65.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees