Pcf11 Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-82   SER-83  5.5 5.4 1.3 -1.0 86.8 87.7 0.2
 SER-83   ARG-84  2.4 2.1 4.5 -13.8 91.2 92.4 21.4
 ARG-84   ASN-85  2.4 2.7 18.2 -14.6 27.5 33.0 32.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-121   LEU-122  12.5 12.3 2.9 -11.3 75.3 70.8 21.1
 LEU-122   PHE-123  10.9 10.9 -5.4 9.2 118.3 111.3 15.4
 PHE-123   GLU-124  7.4 7.1 37.9 39.3 56.3 58.3 633.5
 GLU-124   GLY-125  7.1 5.9 -34.3 -150.3 82.6 57.3 554.2
 GLY-125   SER-126  5.9 8.9 124.0 21.0 141.8 112.0 -1460.5
 SER-126   ALA-127  7.1 8.0 -22.7 -25.6 24.2 36.9 521.2
 ALA-127   LEU-128  4.6 5.1 24.0 -10.2 133.8 145.4 -170.5
 LEU-128   GLU-129  7.4 7.3 14.1 -5.1 105.7 107.7 -45.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees